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thruplex dna seq hv library  (TaKaRa)


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    TaKaRa thruplex dna seq hv library
    Thruplex Dna Seq Hv Library, supplied by TaKaRa, used in various techniques. Bioz Stars score: 94/100, based on 22 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/thruplex dna seq hv library/product/TaKaRa
    Average 94 stars, based on 22 article reviews
    thruplex dna seq hv library - by Bioz Stars, 2026-06
    94/100 stars

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    thruplex dna seq hv library  (TaKaRa)
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    sequencing libraries  (TaKaRa)
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    a . Genome browser view of DCM-labelled enhancer regions, including iPSC enhancers upstream of SOX2 (left) and both iPSC- and DE-specific enhancers on chromosome 10 (right). Tracks show iPSC and DE H3K27ac ChIP-seq enrichment and corresponding significant peaks (in red), and DCM scores of iPSC dox and DE dox (average of n = 3) with significant DCM-labelled enhancers below (in blue and yellow, respectively). Note that only intergenic enhancers are called from the DCM data, meaning no enhancers overlapping with SOX2 are identified. b . Genome browser view of DCM-labelled enhancer regions, including DE enhancers upstream of GATA4 (left) and in an intergenic region on chromosome 2 (right). Tracks shown correspond to those in a. c . Heatmaps showing enrichment of DCM scores in iPSC −dox , iPSC dox and DE dox , as well as H3K27ac ChIP-seq datasets from iPSC and DE, at DCM-labelled enhancers specific to iPSCs (top) and DE (bottom). Profile plots have the same y-axis range as the corresponding heatmap. d . Significantly enriched motifs in iPSC (top) and DE (bottom) enhancer regions. Barplots show significance values reported by HOMER, with bars colored by the percentage of enhancers containing the motif <t>sequence.</t> Black boxes indicate whether the motif is significantly enriched in H3K27ac peaks of the corresponding cell type.
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    dna sequencing libraries  (TaKaRa)
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    a . Genome browser view of DCM-labelled enhancer regions, including iPSC enhancers upstream of SOX2 (left) and both iPSC- and DE-specific enhancers on chromosome 10 (right). Tracks show iPSC and DE H3K27ac ChIP-seq enrichment and corresponding significant peaks (in red), and DCM scores of iPSC dox and DE dox (average of n = 3) with significant DCM-labelled enhancers below (in blue and yellow, respectively). Note that only intergenic enhancers are called from the DCM data, meaning no enhancers overlapping with SOX2 are identified. b . Genome browser view of DCM-labelled enhancer regions, including DE enhancers upstream of GATA4 (left) and in an intergenic region on chromosome 2 (right). Tracks shown correspond to those in a. c . Heatmaps showing enrichment of DCM scores in iPSC −dox , iPSC dox and DE dox , as well as H3K27ac ChIP-seq datasets from iPSC and DE, at DCM-labelled enhancers specific to iPSCs (top) and DE (bottom). Profile plots have the same y-axis range as the corresponding heatmap. d . Significantly enriched motifs in iPSC (top) and DE (bottom) enhancer regions. Barplots show significance values reported by HOMER, with bars colored by the percentage of enhancers containing the motif <t>sequence.</t> Black boxes indicate whether the motif is significantly enriched in H3K27ac peaks of the corresponding cell type.
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    thruplex dna seq library prep  (TaKaRa)
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    a . Genome browser view of DCM-labelled enhancer regions, including iPSC enhancers upstream of SOX2 (left) and both iPSC- and DE-specific enhancers on chromosome 10 (right). Tracks show iPSC and DE H3K27ac ChIP-seq enrichment and corresponding significant peaks (in red), and DCM scores of iPSC dox and DE dox (average of n = 3) with significant DCM-labelled enhancers below (in blue and yellow, respectively). Note that only intergenic enhancers are called from the DCM data, meaning no enhancers overlapping with SOX2 are identified. b . Genome browser view of DCM-labelled enhancer regions, including DE enhancers upstream of GATA4 (left) and in an intergenic region on chromosome 2 (right). Tracks shown correspond to those in a. c . Heatmaps showing enrichment of DCM scores in iPSC −dox , iPSC dox and DE dox , as well as H3K27ac ChIP-seq datasets from iPSC and DE, at DCM-labelled enhancers specific to iPSCs (top) and DE (bottom). Profile plots have the same y-axis range as the corresponding heatmap. d . Significantly enriched motifs in iPSC (top) and DE (bottom) enhancer regions. Barplots show significance values reported by HOMER, with bars colored by the percentage of enhancers containing the motif <t>sequence.</t> Black boxes indicate whether the motif is significantly enriched in H3K27ac peaks of the corresponding cell type.
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    thruplex dna seq libraries  (TaKaRa)
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    TaKaRa thruplex dna seq libraries
    a . Genome browser view of DCM-labelled enhancer regions, including iPSC enhancers upstream of SOX2 (left) and both iPSC- and DE-specific enhancers on chromosome 10 (right). Tracks show iPSC and DE H3K27ac ChIP-seq enrichment and corresponding significant peaks (in red), and DCM scores of iPSC dox and DE dox (average of n = 3) with significant DCM-labelled enhancers below (in blue and yellow, respectively). Note that only intergenic enhancers are called from the DCM data, meaning no enhancers overlapping with SOX2 are identified. b . Genome browser view of DCM-labelled enhancer regions, including DE enhancers upstream of GATA4 (left) and in an intergenic region on chromosome 2 (right). Tracks shown correspond to those in a. c . Heatmaps showing enrichment of DCM scores in iPSC −dox , iPSC dox and DE dox , as well as H3K27ac ChIP-seq datasets from iPSC and DE, at DCM-labelled enhancers specific to iPSCs (top) and DE (bottom). Profile plots have the same y-axis range as the corresponding heatmap. d . Significantly enriched motifs in iPSC (top) and DE (bottom) enhancer regions. Barplots show significance values reported by HOMER, with bars colored by the percentage of enhancers containing the motif <t>sequence.</t> Black boxes indicate whether the motif is significantly enriched in H3K27ac peaks of the corresponding cell type.
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    Average 94 stars, based on 1 article reviews
    thruplex dna seq libraries - by Bioz Stars, 2026-06
    94/100 stars
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    thruplex dna library kit  (TaKaRa)
    94
    TaKaRa thruplex dna library kit
    a . Genome browser view of DCM-labelled enhancer regions, including iPSC enhancers upstream of SOX2 (left) and both iPSC- and DE-specific enhancers on chromosome 10 (right). Tracks show iPSC and DE H3K27ac ChIP-seq enrichment and corresponding significant peaks (in red), and DCM scores of iPSC dox and DE dox (average of n = 3) with significant DCM-labelled enhancers below (in blue and yellow, respectively). Note that only intergenic enhancers are called from the DCM data, meaning no enhancers overlapping with SOX2 are identified. b . Genome browser view of DCM-labelled enhancer regions, including DE enhancers upstream of GATA4 (left) and in an intergenic region on chromosome 2 (right). Tracks shown correspond to those in a. c . Heatmaps showing enrichment of DCM scores in iPSC −dox , iPSC dox and DE dox , as well as H3K27ac ChIP-seq datasets from iPSC and DE, at DCM-labelled enhancers specific to iPSCs (top) and DE (bottom). Profile plots have the same y-axis range as the corresponding heatmap. d . Significantly enriched motifs in iPSC (top) and DE (bottom) enhancer regions. Barplots show significance values reported by HOMER, with bars colored by the percentage of enhancers containing the motif <t>sequence.</t> Black boxes indicate whether the motif is significantly enriched in H3K27ac peaks of the corresponding cell type.
    Thruplex Dna Library Kit, supplied by TaKaRa, used in various techniques. Bioz Stars score: 94/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Average 94 stars, based on 1 article reviews
    thruplex dna library kit - by Bioz Stars, 2026-06
    94/100 stars
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    a . Genome browser view of DCM-labelled enhancer regions, including iPSC enhancers upstream of SOX2 (left) and both iPSC- and DE-specific enhancers on chromosome 10 (right). Tracks show iPSC and DE H3K27ac ChIP-seq enrichment and corresponding significant peaks (in red), and DCM scores of iPSC dox and DE dox (average of n = 3) with significant DCM-labelled enhancers below (in blue and yellow, respectively). Note that only intergenic enhancers are called from the DCM data, meaning no enhancers overlapping with SOX2 are identified. b . Genome browser view of DCM-labelled enhancer regions, including DE enhancers upstream of GATA4 (left) and in an intergenic region on chromosome 2 (right). Tracks shown correspond to those in a. c . Heatmaps showing enrichment of DCM scores in iPSC −dox , iPSC dox and DE dox , as well as H3K27ac ChIP-seq datasets from iPSC and DE, at DCM-labelled enhancers specific to iPSCs (top) and DE (bottom). Profile plots have the same y-axis range as the corresponding heatmap. d . Significantly enriched motifs in iPSC (top) and DE (bottom) enhancer regions. Barplots show significance values reported by HOMER, with bars colored by the percentage of enhancers containing the motif sequence. Black boxes indicate whether the motif is significantly enriched in H3K27ac peaks of the corresponding cell type.

    Journal: bioRxiv

    Article Title: Human DCM-time machine unravels cell state changes during primitive gut tube differentiation

    doi: 10.1101/2025.09.26.678757

    Figure Lengend Snippet: a . Genome browser view of DCM-labelled enhancer regions, including iPSC enhancers upstream of SOX2 (left) and both iPSC- and DE-specific enhancers on chromosome 10 (right). Tracks show iPSC and DE H3K27ac ChIP-seq enrichment and corresponding significant peaks (in red), and DCM scores of iPSC dox and DE dox (average of n = 3) with significant DCM-labelled enhancers below (in blue and yellow, respectively). Note that only intergenic enhancers are called from the DCM data, meaning no enhancers overlapping with SOX2 are identified. b . Genome browser view of DCM-labelled enhancer regions, including DE enhancers upstream of GATA4 (left) and in an intergenic region on chromosome 2 (right). Tracks shown correspond to those in a. c . Heatmaps showing enrichment of DCM scores in iPSC −dox , iPSC dox and DE dox , as well as H3K27ac ChIP-seq datasets from iPSC and DE, at DCM-labelled enhancers specific to iPSCs (top) and DE (bottom). Profile plots have the same y-axis range as the corresponding heatmap. d . Significantly enriched motifs in iPSC (top) and DE (bottom) enhancer regions. Barplots show significance values reported by HOMER, with bars colored by the percentage of enhancers containing the motif sequence. Black boxes indicate whether the motif is significantly enriched in H3K27ac peaks of the corresponding cell type.

    Article Snippet: Sequencing libraries were prepped after LpnPI digestion using the ThruPLEX DNA-Seq HV kit (Takara, R400740).

    Techniques: ChIP-sequencing, Sequencing